☰ Navigation Tabs
AmpC beta-lactamase in complex with 2-acetamidothiophene-3-carboxylic acid
Crystallization Crystal Properties Matthews coefficient Solvent content 2.49 50.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.905 α = 90 b = 77.057 β = 116.86 c = 97.52 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 210 2005-10-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.49 50 99.8 0.042 14.6 2.8 126514 126514
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.49 1.54 99.5 0.359 2.3 2.6 12573
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.49 87.04 126505 126514 6318 99.5 0.136 0.135 0.1446 0.168 0.1741 RANDOM 12.36
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.23 0.26 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.173 r_dihedral_angle_4_deg 18.358 r_dihedral_angle_3_deg 12.873 r_sphericity_free 7.235 r_dihedral_angle_1_deg 6.242 r_scangle_it 4.141 r_sphericity_bonded 3.34 r_scbond_it 2.955 r_mcangle_it 2.117 r_angle_refined_deg 1.823
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.173 r_dihedral_angle_4_deg 18.358 r_dihedral_angle_3_deg 12.873 r_sphericity_free 7.235 r_dihedral_angle_1_deg 6.242 r_scangle_it 4.141 r_sphericity_bonded 3.34 r_scbond_it 2.955 r_mcangle_it 2.117 r_angle_refined_deg 1.823 r_rigid_bond_restr 1.418 r_mcbond_it 1.417 r_angle_other_deg 1.019 r_mcbond_other 0.637 r_symmetry_vdw_refined 0.342 r_symmetry_vdw_other 0.275 r_nbd_refined 0.241 r_nbd_other 0.202 r_symmetry_hbond_refined 0.193 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.164 r_chiral_restr 0.124 r_nbtor_other 0.088 r_bond_refined_d 0.014 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5897 Nucleic Acid Atoms Solvent Atoms 967 Heterogen Atoms 114
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction