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Methyltransferase Domain of Human TAR (HIV-1) RNA binding protein 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 300 20% PEG 5kMME, 0.1 M Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 300K
Crystal Properties Matthews coefficient Solvent content 2.08 40.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.237 α = 90 b = 86.93 β = 100.85 c = 48.266 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-06-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.0 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 47.4 96.6 42523 42523
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.64 67.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 47.4 40358 40358 2133 96.4 0.17839 0.17684 0.1759 0.20882 0.2098 RANDOM 20.752
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.3 -0.39 1.16 -1.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.914 r_dihedral_angle_4_deg 16.537 r_dihedral_angle_3_deg 13.217 r_dihedral_angle_1_deg 5.41 r_scangle_it 3.921 r_scbond_it 2.442 r_mcangle_it 1.558 r_angle_refined_deg 1.385 r_mcbond_it 0.915 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.914 r_dihedral_angle_4_deg 16.537 r_dihedral_angle_3_deg 13.217 r_dihedral_angle_1_deg 5.41 r_scangle_it 3.921 r_scbond_it 2.442 r_mcangle_it 1.558 r_angle_refined_deg 1.385 r_mcbond_it 0.915 r_nbtor_refined 0.306 r_nbd_refined 0.209 r_symmetry_vdw_refined 0.208 r_symmetry_hbond_refined 0.148 r_xyhbond_nbd_refined 0.127 r_chiral_restr 0.09 r_bond_refined_d 0.011 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2462 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 52
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction HKL-2000 data scaling MOLREP phasing