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Structure of Microsomal Glutathione Transferase 1 in Complex with Glutathione
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.8 α = 90 b = 81.8 β = 90 c = 100 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 electron M SINGLE WAVELENGTH
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B ELECTRON CRYSTALLOGRAPHY THROUGHOUT 3.2 10 4409 457 79.25 0.34237 0.33894 0.37628 RANDOM 26.662
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.58 -1.29 -2.58 3.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.936 r_dihedral_angle_3_deg 26.23 r_dihedral_angle_4_deg 16.716 r_dihedral_angle_1_deg 9.855 r_angle_refined_deg 1.863 r_scangle_it 1.666 r_scbond_it 1.131 r_mcangle_it 0.981 r_mcbond_it 0.529 r_symmetry_vdw_refined 0.414
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.936 r_dihedral_angle_3_deg 26.23 r_dihedral_angle_4_deg 16.716 r_dihedral_angle_1_deg 9.855 r_angle_refined_deg 1.863 r_scangle_it 1.666 r_scbond_it 1.131 r_mcangle_it 0.981 r_mcbond_it 0.529 r_symmetry_vdw_refined 0.414 r_symmetry_hbond_refined 0.375 r_nbd_refined 0.363 r_nbtor_refined 0.336 r_xyhbond_nbd_refined 0.267 r_chiral_restr 0.12 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 964 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement
Sample Microsomal Glutathione Transferase 1 in Complex with Glutathione
Specimen Preparation Sample Aggregation State 2D ARRAY
3D Reconstruction Reconstruction Method CRYSTALLOGRAPHY Number of Particles Reported Resolution (Å) 3.2 Resolution Method Other Details Refinement Type Symmetry Type 2D CRYSTAL
Data Acquisition Detector Type Electron Dose (electrons/Å**2) 10
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) 4 Microscope Model JEOL 3000SFF Minimum Defocus (nm) 300 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) 62.6 Nominal CS 1.6 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 60000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details Electron diffraction at 1.2 m camera length
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details Crystallographic