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NMR structures of SAM domain of Deleted in Liver Cancer 2 (DLC2)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 1mM 15N, 13C labelled, 20mM phosphate buffer, pH 7.1, 0.05% NaN3, 4mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 20mM phosphate 7.1 ambient 293 2 3D_15N-separated_NOESY 1mM 15N, 13C labelled, 20mM phosphate buffer, pH 7.1, 0.05% NaN3, 4mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 20mM phosphate 7.1 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing, molecular dynamics, torsion angle dynamics The structure was based on 1098 NOE-derived distance constraints and 104 angel constraints from Talos NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Additional NMR Experimental Information Details The structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 1 Frank Delaglio 2 data analysis Sparky 3.110 Goddard, T.D., Kneller,D.G. 3 structure solution CYANA 2.1 Gntert, P. 4 refinement Amber 7 Case, D.A.