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Crystal structure of oxidized CprK in complex with o-chlorophenolacetic acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 277 1.8 M Ammonium sulphate, 1mM orthochlorophenol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.08 60.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 104.437 α = 90 b = 112.185 β = 90 c = 119.495 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2004-03-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 0.9 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 99.2 0.102 16.6 35512 40
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.25 100 0.573 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.2 19.92 33350 33350 1760 100 0.18579 0.18579 0.18346 0.22945 0.2328 RANDOM 39.915
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 -0.09 0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.235 r_dihedral_angle_3_deg 18.358 r_dihedral_angle_4_deg 16.584 r_dihedral_angle_1_deg 6.429 r_scangle_it 4.039 r_scbond_it 2.699 r_angle_refined_deg 1.989 r_mcangle_it 1.805 r_mcbond_it 1.24 r_angle_other_deg 0.97
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.235 r_dihedral_angle_3_deg 18.358 r_dihedral_angle_4_deg 16.584 r_dihedral_angle_1_deg 6.429 r_scangle_it 4.039 r_scbond_it 2.699 r_angle_refined_deg 1.989 r_mcangle_it 1.805 r_mcbond_it 1.24 r_angle_other_deg 0.97 r_mcbond_other 0.275 r_symmetry_vdw_other 0.261 r_nbd_refined 0.217 r_nbd_other 0.196 r_symmetry_vdw_refined 0.195 r_nbtor_refined 0.186 r_xyhbond_nbd_refined 0.159 r_chiral_restr 0.112 r_xyhbond_nbd_other 0.097 r_nbtor_other 0.093 r_symmetry_hbond_refined 0.072 r_bond_refined_d 0.024 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3772 Nucleic Acid Atoms Solvent Atoms 228 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling MLPHARE phasing