Experiment: 2GR7

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	10	293	100 mM CHES, 12% PEG 4000 and 200 mM ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.81	56.3

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 97.34	α = 90
b = 56.296	β = 90.04
c = 158.706	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100					M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE ID14-3	0.931	ESRF	ID14-3

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.3	20					38510	2	2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2.3	20	37886	1902	98.31	0.227	0.226	0.226	0.252	RANDOM	26.614

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
1.16		-0.18	1.24		-2.4

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	41.612
r_dihedral_angle_4_deg	23.201
r_dihedral_angle_3_deg	13.147
r_dihedral_angle_1_deg	8.431
r_scangle_it	1.408
r_angle_refined_deg	1.401
r_scbond_it	0.909
r_mcangle_it	0.351
r_nbtor_refined	0.28
r_mcbond_it	0.274

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	41.612
r_dihedral_angle_4_deg	23.201
r_dihedral_angle_3_deg	13.147
r_dihedral_angle_1_deg	8.431
r_scangle_it	1.408
r_angle_refined_deg	1.401
r_scbond_it	0.909
r_mcangle_it	0.351
r_nbtor_refined	0.28
r_mcbond_it	0.274
r_symmetry_vdw_refined	0.224
r_nbd_refined	0.194
r_xyhbond_nbd_refined	0.166
r_symmetry_hbond_refined	0.157
r_chiral_restr	0.075
r_bond_refined_d	0.012
r_gen_planes_refined	0.005

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4177
Nucleic Acid Atoms
Solvent Atoms	332
Heterogen Atoms	104

Software

Software
Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
CCP4	data scaling
SOLVE	phasing

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.