☰ Navigation Tabs
Crystal structure of Mycobacterium tuberculosis trHbN, GlnE11Val mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.6 277 di-potassium hydrogen phosphate + sodium dihydrogen phosphate 1.8 M, pH 7.6, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.21 44.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.034 α = 90 b = 62.388 β = 90 c = 90.974 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2005-07-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 0.934 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 51.43 73.2 0.143 2.5 10631 10631
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.21 64.7 0.647 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 51.43 10631 10631 571 72.05 0.21201 0.21201 0.20834 0.2154 0.28541 0.2896 RANDOM 21.359
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.35 1.4 -1.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.645 r_dihedral_angle_3_deg 14.068 r_dihedral_angle_4_deg 12.691 r_scangle_it 4.957 r_dihedral_angle_1_deg 4.668 r_scbond_it 3.546 r_mcangle_it 2.2 r_mcbond_it 1.327 r_angle_refined_deg 1.13 r_nbtor_refined 0.293
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.645 r_dihedral_angle_3_deg 14.068 r_dihedral_angle_4_deg 12.691 r_scangle_it 4.957 r_dihedral_angle_1_deg 4.668 r_scbond_it 3.546 r_mcangle_it 2.2 r_mcbond_it 1.327 r_angle_refined_deg 1.13 r_nbtor_refined 0.293 r_symmetry_hbond_refined 0.251 r_nbd_refined 0.191 r_symmetry_vdw_refined 0.172 r_xyhbond_nbd_refined 0.13 r_chiral_restr 0.071 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1900 Nucleic Acid Atoms Solvent Atoms 49 Heterogen Atoms 91
Software Software Software Name Purpose MOSFLM data reduction MOLREP phasing REFMAC refinement