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Crystal structure of Mycobacterium tuberculosis trHbN TyrB10Phe mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.8 277 sodium dihydrogen phosphate + di-potassium hydrogen phosphate 1.8 M, pH 7.8, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.19 43.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.278 α = 90 b = 61.932 β = 90 c = 90.291 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2005-06-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B 0.843 EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.72 51.1 97.1 0.036 3.7 27177 27177
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.72 1.81 82 0.193 6.9 3.6 3259
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.731 51.1 25582 25582 1349 99.16 0.19466 0.19466 0.19261 0.1927 0.23317 0.2331 RANDOM 18.959
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 0.17 -0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.017 r_dihedral_angle_4_deg 12.067 r_dihedral_angle_3_deg 11.933 r_dihedral_angle_1_deg 4.994 r_scangle_it 1.301 r_angle_refined_deg 1.247 r_mcangle_it 1.161 r_scbond_it 0.94 r_mcbond_it 0.692 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.017 r_dihedral_angle_4_deg 12.067 r_dihedral_angle_3_deg 11.933 r_dihedral_angle_1_deg 4.994 r_scangle_it 1.301 r_angle_refined_deg 1.247 r_mcangle_it 1.161 r_scbond_it 0.94 r_mcbond_it 0.692 r_nbtor_refined 0.3 r_nbd_refined 0.217 r_symmetry_vdw_refined 0.209 r_xyhbond_nbd_refined 0.128 r_symmetry_hbond_refined 0.123 r_chiral_restr 0.084 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1914 Nucleic Acid Atoms Solvent Atoms 333 Heterogen Atoms 91
Software Software Software Name Purpose MOSFLM data reduction MOLREP phasing REFMAC refinement