☰ Navigation Tabs
Thermotoga maritima maltotriose binding protein, ligand free form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.5 290 0.2M Magnesium Chloride Hexahydrate, 0.1M pH5.5 Bis-Tris, 25% PEG 2000, VAPOR DIFFUSION, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.85 56.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.04 α = 90 b = 106.23 β = 90 c = 186.04 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2006-02-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 43.19 96.9 0.082 19.05 84588 84588 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.2 100 93.7 0.419 4.57 10923
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 43.19 84589 84588 4230 100 0.214 0.214 0.212 0.249 0.2582 RANDOM 36.954
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.49 -1.06 -0.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.389 r_dihedral_angle_4_deg 19.706 r_dihedral_angle_3_deg 14.345 r_dihedral_angle_1_deg 5.827 r_scangle_it 2.638 r_scbond_it 1.837 r_angle_refined_deg 1.309 r_mcangle_it 1.241 r_mcbond_it 1.109 r_angle_other_deg 0.79
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.389 r_dihedral_angle_4_deg 19.706 r_dihedral_angle_3_deg 14.345 r_dihedral_angle_1_deg 5.827 r_scangle_it 2.638 r_scbond_it 1.837 r_angle_refined_deg 1.309 r_mcangle_it 1.241 r_mcbond_it 1.109 r_angle_other_deg 0.79 r_symmetry_vdw_other 0.253 r_nbd_refined 0.211 r_nbtor_refined 0.18 r_nbd_other 0.168 r_xyhbond_nbd_refined 0.159 r_mcbond_other 0.153 r_symmetry_vdw_refined 0.141 r_nbtor_other 0.083 r_symmetry_hbond_refined 0.077 r_chiral_restr 0.073 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8676 Nucleic Acid Atoms Solvent Atoms 431 Heterogen Atoms
Software Software Software Name Purpose XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection PHASER phasing