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Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 0.1M Ammonium sulphate, 0.1M Tris, 25%P3350, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.36 47.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.965 α = 90 b = 68.998 β = 90 c = 120.811 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 150 CCD SBC-2 2005-10-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97945 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.801 60.412 97.0542 25734 24976
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.801 1.847 86.24
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.801 60.41 2 25734 24976 1315 97.05 0.24931 0.2475 0.24747 0.2458 0.28416 0.2853 RANDOM 34.21
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.03 -0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.889 r_dihedral_angle_3_deg 15.415 r_dihedral_angle_4_deg 15.119 r_dihedral_angle_1_deg 5.489 r_scangle_it 3.25 r_scbond_it 2.162 r_angle_refined_deg 1.227 r_mcangle_it 1.211 r_mcbond_it 1.023 r_nbtor_refined 0.295
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.889 r_dihedral_angle_3_deg 15.415 r_dihedral_angle_4_deg 15.119 r_dihedral_angle_1_deg 5.489 r_scangle_it 3.25 r_scbond_it 2.162 r_angle_refined_deg 1.227 r_mcangle_it 1.211 r_mcbond_it 1.023 r_nbtor_refined 0.295 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.171 r_symmetry_vdw_refined 0.159 r_symmetry_hbond_refined 0.152 r_chiral_restr 0.088 r_bond_refined_d 0.012 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2104 Nucleic Acid Atoms Solvent Atoms 225 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling