2G9O

Solution structure of the apo form of the third metal-binding domain of ATP7A protein (Menkes Disease protein)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.5mM Apo-MNK3 unlabelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT,90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
22D TOCSY1.5mM Apo-MNK3 unlabelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT,90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
33D_15N-separated_NOESY1mM Apo-MNK3 15N labelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
4(H)CCH-TOCSY1mM Apo-MNK3 15N, 13C labelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
5CBCA(CO)NH1mM Apo-MNK3 15N, 13C labelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
6CBCANH1mM Apo-MNK3 15N, 13C labelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
73D_13C-separated_NOESY1mM Apo-MNK3 15N, 13C labelled sample, 100mM phosphate buffer, pH 7.0, 1mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O100mM phosphate buffer7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2BrukerAVANCE700
3BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
Torsion angle dynamics coupled with simulated annealing followed by restrained energy minimization1456 meaningful NOE upper distance limits, 134 dihedral angles restraints were used for structure calculationsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number300
Conformers Submitted Total Number30
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR
2data analysisXEASY1.3
3data analysisCARA
4structure solutionATNOSCANDID1.0Herrmann, T. et al.
5refinementAmber8.0Case, D.A. et al.