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anomalous substructure of proteinase K
Crystallization Crystal Properties Matthews coefficient Solvent content 2.02 39.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.78 α = 90 b = 67.78 β = 90 c = 101.88 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.14 30 13684
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.14 30 13399 285 99.96 0.16398 0.1631 0.1746 0.20322 RANDOM 6.808
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.51 -0.51 1.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.208 r_dihedral_angle_4_deg 22.245 r_dihedral_angle_3_deg 14.746 r_dihedral_angle_1_deg 6.946 r_scangle_it 6.065 r_scbond_it 4.399 r_angle_refined_deg 1.795 r_mcangle_it 1.688 r_mcbond_it 1.034 r_metal_ion_refined 0.348
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.208 r_dihedral_angle_4_deg 22.245 r_dihedral_angle_3_deg 14.746 r_dihedral_angle_1_deg 6.946 r_scangle_it 6.065 r_scbond_it 4.399 r_angle_refined_deg 1.795 r_mcangle_it 1.688 r_mcbond_it 1.034 r_metal_ion_refined 0.348 r_nbtor_refined 0.301 r_xyhbond_nbd_refined 0.287 r_nbd_refined 0.219 r_symmetry_vdw_refined 0.218 r_symmetry_hbond_refined 0.136 r_chiral_restr 0.13 r_bond_refined_d 0.026 r_gen_planes_refined 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2031 Nucleic Acid Atoms Solvent Atoms 130 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing