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Anomalous substructure of NBR1PB1
Crystallization Crystal Properties Matthews coefficient Solvent content 3.22 61.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.4 α = 90 b = 101.4 β = 90 c = 42.59 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 30 7391
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.15 30 7223 168 99.85 0.21647 0.21444 0.221 0.32262 RANDOM 51.653
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.35 -1.18 -2.35 3.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.198 r_dihedral_angle_3_deg 16.513 r_dihedral_angle_1_deg 5.825 r_scangle_it 5.37 r_scbond_it 3.833 r_angle_refined_deg 1.521 r_mcangle_it 1.519 r_mcbond_it 1.183 r_angle_other_deg 0.797 r_symmetry_vdw_refined 0.287
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.198 r_dihedral_angle_3_deg 16.513 r_dihedral_angle_1_deg 5.825 r_scangle_it 5.37 r_scbond_it 3.833 r_angle_refined_deg 1.521 r_mcangle_it 1.519 r_mcbond_it 1.183 r_angle_other_deg 0.797 r_symmetry_vdw_refined 0.287 r_xyhbond_nbd_refined 0.209 r_symmetry_vdw_other 0.209 r_symmetry_hbond_refined 0.208 r_nbd_refined 0.19 r_mcbond_other 0.185 r_nbd_other 0.177 r_nbtor_refined 0.175 r_chiral_restr 0.097 r_nbtor_other 0.093 r_bond_refined_d 0.016 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 687 Nucleic Acid Atoms Solvent Atoms 52 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing