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Anomalous substructure of lysozyme at pH 4.5
Crystallization Crystal Properties Matthews coefficient Solvent content 2 38.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.66 α = 90 b = 78.66 β = 90 c = 37.12 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.84 30 10564
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.84 30 10347 217 99.92 0.16683 0.16585 0.1772 0.21397 RANDOM 21.904
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.33 0.33 -0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.291 r_dihedral_angle_4_deg 20.549 r_dihedral_angle_3_deg 14.439 r_dihedral_angle_1_deg 6.435 r_scangle_it 6.424 r_scbond_it 4.413 r_mcangle_it 1.939 r_angle_refined_deg 1.849 r_mcbond_it 1.344 r_angle_other_deg 1.053
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.291 r_dihedral_angle_4_deg 20.549 r_dihedral_angle_3_deg 14.439 r_dihedral_angle_1_deg 6.435 r_scangle_it 6.424 r_scbond_it 4.413 r_mcangle_it 1.939 r_angle_refined_deg 1.849 r_mcbond_it 1.344 r_angle_other_deg 1.053 r_mcbond_other 0.28 r_symmetry_vdw_other 0.279 r_symmetry_hbond_refined 0.22 r_nbd_refined 0.219 r_nbd_other 0.199 r_xyhbond_nbd_refined 0.195 r_nbtor_refined 0.164 r_chiral_restr 0.122 r_nbtor_other 0.087 r_symmetry_vdw_refined 0.065 r_bond_refined_d 0.025 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 998 Nucleic Acid Atoms Solvent Atoms 140 Heterogen Atoms 7
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing