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anomalous substructure of 3-ISOPROPYLMALATE DEHYDROGENASE
Crystallization Crystal Properties Matthews coefficient Solvent content 2.51 51.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.57 α = 90 b = 98.58 β = 90 c = 184.03 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 97028
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2 30 94983 2045 99.86 0.21043 0.20941 0.2147 0.26011 RANDOM 43.784
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.03 1.19 -3.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.848 r_dihedral_angle_4_deg 17.131 r_dihedral_angle_3_deg 15.929 r_dihedral_angle_1_deg 6.874 r_scangle_it 6.239 r_scbond_it 4.433 r_mcangle_it 1.973 r_angle_refined_deg 1.703 r_mcbond_it 1.481 r_angle_other_deg 0.939
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.848 r_dihedral_angle_4_deg 17.131 r_dihedral_angle_3_deg 15.929 r_dihedral_angle_1_deg 6.874 r_scangle_it 6.239 r_scbond_it 4.433 r_mcangle_it 1.973 r_angle_refined_deg 1.703 r_mcbond_it 1.481 r_angle_other_deg 0.939 r_symmetry_vdw_other 0.303 r_symmetry_hbond_refined 0.298 r_xyhbond_nbd_refined 0.291 r_mcbond_other 0.266 r_nbd_refined 0.23 r_nbd_other 0.192 r_symmetry_vdw_refined 0.177 r_nbtor_refined 0.176 r_chiral_restr 0.107 r_nbtor_other 0.087 r_xyhbond_nbd_other 0.035 r_bond_refined_d 0.02 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9972 Nucleic Acid Atoms Solvent Atoms 533 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing