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Anomalous substructure of alpha-lactalbumin
Crystallization Crystal Properties Matthews coefficient Solvent content 2.51 50.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.43 α = 90 b = 104.8 β = 90 c = 119.11 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 30 35381
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.3 30 34659 722 91.25 0.29731 0.29597 0.35933 RANDOM 36.847
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.06 2.82 -1.76
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.257 r_dihedral_angle_4_deg 32.394 r_dihedral_angle_3_deg 19.183 r_dihedral_angle_1_deg 8.834 r_scangle_it 6.844 r_scbond_it 4.987 r_angle_refined_deg 2.053 r_mcangle_it 1.939 r_angle_other_deg 1.174 r_mcbond_it 1.031
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.257 r_dihedral_angle_4_deg 32.394 r_dihedral_angle_3_deg 19.183 r_dihedral_angle_1_deg 8.834 r_scangle_it 6.844 r_scbond_it 4.987 r_angle_refined_deg 2.053 r_mcangle_it 1.939 r_angle_other_deg 1.174 r_mcbond_it 1.031 r_symmetry_vdw_refined 0.36 r_mcbond_other 0.287 r_nbd_refined 0.251 r_symmetry_vdw_other 0.249 r_symmetry_metal_ion_refined 0.248 r_symmetry_hbond_refined 0.234 r_metal_ion_refined 0.197 r_nbd_other 0.188 r_nbtor_refined 0.185 r_xyhbond_nbd_refined 0.183 r_xyhbond_nbd_other 0.152 r_chiral_restr 0.138 r_nbtor_other 0.098 r_bond_refined_d 0.029 r_bond_other_d 0.012 r_gen_planes_refined 0.008 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5856 Nucleic Acid Atoms Solvent Atoms 74 Heterogen Atoms 8
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing