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Structure of E.coli FabD complexed with sulfate
Crystallization Crystal Properties Matthews coefficient Solvent content 4.39 71.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.109 α = 90 b = 83.109 β = 90 c = 164.237 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH mirror 2001-07-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.76 20 100 0.061 44.7 57822 57822 4.7 4.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.76 1.87 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.76 20 54801 54801 2932 99.95 0.217 0.21571 0.21457 0.2239 0.23737 0.2465 RANDOM 22.813
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.45 0.45 -0.91
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.201 r_dihedral_angle_1_deg 7.156 r_scangle_it 3.788 r_mcangle_it 2.573 r_scbond_it 2.355 r_mcbond_it 1.679 r_angle_refined_deg 0.761 r_symmetry_hbond_refined 0.625 r_angle_other_deg 0.578 r_nbd_refined 0.406
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.201 r_dihedral_angle_1_deg 7.156 r_scangle_it 3.788 r_mcangle_it 2.573 r_scbond_it 2.355 r_mcbond_it 1.679 r_angle_refined_deg 0.761 r_symmetry_hbond_refined 0.625 r_angle_other_deg 0.578 r_nbd_refined 0.406 r_symmetry_vdw_refined 0.354 r_xyhbond_nbd_refined 0.3 r_symmetry_vdw_other 0.294 r_nbd_other 0.256 r_chiral_restr 0.045 r_xyhbond_nbd_other 0.026 r_bond_refined_d 0.005 r_gen_planes_refined 0.003 r_gen_planes_other 0.002 r_bond_other_d r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_nbtor_refined r_nbtor_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2257 Nucleic Acid Atoms Solvent Atoms 223 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing