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The structure of N-acetyl-gamma-glutamyl-phosphate reductase from Salmonella typhimurium.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 295 2M (NH4)SO4, 0.1M Tris pH7.0, 0.2M LiSO4, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 5.708 78.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 165.001 α = 90 b = 165.001 β = 90 c = 105.778 γ = 120
Symmetry Space Group P 64 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-2 2004-08-24 M SAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97937 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 98.7 37632 37632
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 95.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.3 49.63 35742 35742 1890 98.68 0.17084 0.17084 0.16962 0.1678 0.19344 0.192 RANDOM 48.292
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.27 -0.64 -1.27 1.91
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.322 r_dihedral_angle_4_deg 19.766 r_dihedral_angle_3_deg 13.867 r_dihedral_angle_1_deg 6.583 r_scangle_it 3.527 r_scbond_it 2.333 r_angle_refined_deg 1.471 r_mcangle_it 1.335 r_mcbond_it 0.909 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.322 r_dihedral_angle_4_deg 19.766 r_dihedral_angle_3_deg 13.867 r_dihedral_angle_1_deg 6.583 r_scangle_it 3.527 r_scbond_it 2.333 r_angle_refined_deg 1.471 r_mcangle_it 1.335 r_mcbond_it 0.909 r_nbtor_refined 0.305 r_nbd_refined 0.196 r_symmetry_hbond_refined 0.183 r_symmetry_vdw_refined 0.172 r_xyhbond_nbd_refined 0.154 r_chiral_restr 0.102 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2555 Nucleic Acid Atoms Solvent Atoms 329 Heterogen Atoms 50
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling HKL-3000 phasing SHELX phasing SOLVE phasing RESOLVE phasing DM phasing CCP4 phasing Coot model building O model building ARP/wARP model building