2FVN
The fibrillar tip complex of the Afa/Dr adhesins from pathogen E. coli displays synergistic binding to 5 1 and v 3 integrins
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.5mM afaD-dsc, U-15N, 13C; 50mM Na phosphate buffer(pH 7.0); 50mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM phosphate | 7.0 | ambient | 303 | |
2 | 3D_15N-separated_NOESY | 0.5mM afaD-dsc, U-15N, 13C; 50mM Na phosphate buffer(pH 7.0); 50mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM phosphate | 7.0 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
Aria-implemented distance geometry, simulated annealing | Structure based on 3839 noe-based restraints (2951 unambiguous, 1423 ambiguous) and 116 torsion angles (talos) | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | REGULARIZED MEAN STRUCTURE |
Conformers Calculated Total Number | |
Conformers Submitted Total Number | 1 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | ARIA | 1.2 | Linge, O'Donoghue, Nilges |
2 | structure solution | ARIA | 1.2 | Linge, O'Donoghue, Nilges |
3 | data analysis | NMRView | 4.0 | Johnson, Blevins |
4 | processing | NMRPipe | 2.1 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
5 | collection | XwinNMR | 3.1 | Bruker Biospin |