☰ Navigation Tabs
Complex SecA:ATP from Escherichia coli
Crystallization Crystal Properties Matthews coefficient Solvent content 2.74 55.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.382 α = 90 b = 89.478 β = 100.73 c = 163.349 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.97889 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 96.9 0.077 0.077 8.5 3.5 110188 106818 36.38
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.32 92 0.644 0.644 1.1 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.2 19.61 104943 5245 96.94 0.211 0.208 0.262 0.27 0.3072 RANDOM 17.965
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.414 r_dihedral_angle_3_deg 19.921 r_dihedral_angle_4_deg 18.555 r_dihedral_angle_1_deg 8.422 r_scangle_it 5.212 r_scbond_it 3.737 r_angle_refined_deg 2.4 r_mcangle_it 2.181 r_mcbond_it 1.97 r_angle_other_deg 1.417
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.414 r_dihedral_angle_3_deg 19.921 r_dihedral_angle_4_deg 18.555 r_dihedral_angle_1_deg 8.422 r_scangle_it 5.212 r_scbond_it 3.737 r_angle_refined_deg 2.4 r_mcangle_it 2.181 r_mcbond_it 1.97 r_angle_other_deg 1.417 r_mcbond_other 0.277 r_nbd_refined 0.243 r_symmetry_vdw_other 0.243 r_nbd_other 0.229 r_symmetry_hbond_refined 0.205 r_nbtor_refined 0.192 r_xyhbond_nbd_refined 0.187 r_symmetry_vdw_refined 0.183 r_chiral_restr 0.143 r_xyhbond_nbd_other 0.122 r_nbtor_other 0.097 r_bond_refined_d 0.034 r_gen_planes_refined 0.01 r_gen_planes_other 0.004 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11316 Nucleic Acid Atoms Solvent Atoms 431 Heterogen Atoms 62
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling SHELXD phasing SHARP phasing