2FQE

Crystal Structures of E. coli Laccase CueO under different copper binding situations


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.629310% polyethylene glycol 4000, 15% Isopropanol, 100mM tri-Sodium Citrate dihydrate pH5.6, 0.5mM CuCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.1943.92

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 69.587α = 90
b = 73.205β = 90
c = 184.324γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-07-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBSRF BEAMLINE 3W1A1.0BSRF3W1A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.910099.80.1096.735855
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.91.941000.401

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9292.0635815179298.560.1670.1650.205RANDOM19.656
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.61-0.910.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.459
r_dihedral_angle_3_deg14.656
r_dihedral_angle_4_deg14.26
r_dihedral_angle_1_deg7.279
r_scangle_it3.374
r_scbond_it2.307
r_mcangle_it2.103
r_mcbond_it1.263
r_angle_refined_deg1.129
r_nbtor_refined0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.459
r_dihedral_angle_3_deg14.656
r_dihedral_angle_4_deg14.26
r_dihedral_angle_1_deg7.279
r_scangle_it3.374
r_scbond_it2.307
r_mcangle_it2.103
r_mcbond_it1.263
r_angle_refined_deg1.129
r_nbtor_refined0.31
r_metal_ion_refined0.231
r_nbd_refined0.212
r_symmetry_hbond_refined0.212
r_symmetry_vdw_refined0.197
r_xyhbond_nbd_refined0.127
r_chiral_restr0.087
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3574
Nucleic Acid Atoms
Solvent Atoms416
Heterogen Atoms19

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
MAR345data collection
AMoREphasing