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Structure of PR10-allergen-like protein PA1206 from Pseudomonas aeruginosa PAO1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.6 298 6M ammonium nitrate, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.56 65.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.72 α = 90 b = 90.72 β = 90 c = 107.179 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 103 CCD ADSC QUANTUM 315 2005-10-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97940 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 50 98.1 0.083 36.7 8.7 17000 17000 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 87 0.533 1.58 6.1 1496
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.5 31.69 16881 16881 874 100 0.223 0.223 0.221 0.2179 0.261 0.2537 RANDOM 50.668
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.35 1.17 2.35 -3.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.406 r_dihedral_angle_4_deg 18.867 r_dihedral_angle_3_deg 18.538 r_dihedral_angle_1_deg 6.656 r_scangle_it 5.024 r_scbond_it 3.355 r_angle_refined_deg 1.926 r_mcangle_it 1.724 r_mcbond_it 1.143 r_nbtor_refined 0.326
Show All KeysRMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.406 r_dihedral_angle_4_deg 18.867 r_dihedral_angle_3_deg 18.538 r_dihedral_angle_1_deg 6.656 r_scangle_it 5.024 r_scbond_it 3.355 r_angle_refined_deg 1.926 r_mcangle_it 1.724 r_mcbond_it 1.143 r_nbtor_refined 0.326 r_nbd_refined 0.225 r_symmetry_vdw_refined 0.182 r_symmetry_hbond_refined 0.182 r_xyhbond_nbd_refined 0.165 r_chiral_restr 0.116 r_bond_refined_d 0.022 r_gen_planes_refined 0.007
Hide All KeysNon-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2216 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MLPHARE phasing DM phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction HKL-2000 data scaling