☰ Navigation Tabs
The structure of stem loop IV of Tetrahymena telomerase RNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1 MM unlabelled samples 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 2 2D TOCSY 1 MM unlabelled samples 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 3 3D_13C-separated_NOESY 0.5 mM, 15N,13C-labelled 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 4 HCP TRIPLE RESONANCE 0.5 mM, 15N,13C-labelled 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 5 3D 13C-31P HETCOR 0.5 mM, 15N,13C-labelled 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 6 3D 13C TOCSY-HSQC 0.5 mM, 15N,13C-labelled 10 mM SODIUM PHOSHATE, PH 6.0, 100% D2O 10mM 6.0 1 atm 298 7 HNN-COSY 0.5 mM, 15N,13C-labelled 10 mM SODIUM PHOSHATE, PH 6.0, 90% H2O, 10% D2O 10mM 6.0 1 atm 298 8 IPAP-HSQC 0.5 mM, 15N,13C-labelled 10 MM SODIUM SUCCINATE, PH 6.0, 14 MG/ML PF1 BACTERIAPHAGE, 100% D2O 10mM 6.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DMX 750 3 Varian INOVA 600
NMR Refinement Method Details Software TORSION ANGLE DYNAMICS, simulated annealing X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (fewest violations,lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR 2.9.7 Clore, G.M. & Kuszewski, J. 2 processing NMRPipe 2.3 F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax 3 data analysis Sparky 3.110 T. D. Goddard and D. G. Kneller 4 collection XwinNMR 3.0 Bruker 5 refinement X-PLOR 2.9.7 Clore, G.M. & Kuszewski, J.