☰ Navigation Tabs
Solution structure of human p53 DNA binding domain.
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 0.4 mM p53 core U-15N,13C, 2H; 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 2 3D_15N-separated_NOESY 0.4 mM p53 core U-15N,13C, 2H; 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 3 2D NOESY 0.3 mM p53 core U-15N,13C, 2H + reverse ILV 13CH3 ; 25 mM Tris-HCl pH 7.1; 150 mM NaCl;
90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 4 3D_13C-separated_NOESY 0.3 mM p53 core U-15N,13C, 2H + reverse ILV 13CH3 ; 25 mM Tris-HCl pH 7.1; 150 mM NaCl;
90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 5 2D NOESY 0.3 mM p53 core U-15N,13C, 2H + reverse ILV 13CH3 + reverse Tyr ; 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 100% D2O 100% D2O 150 mM 7.1 ambient 298 6 3D_13C-separated_NOESY 0.3 mM p53 core U-15N,13C, 2H + reverse ILV 13CH3 + reverse Tyr ; 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 100% D2O 100% D2O 150 mM 7.1 ambient 298 7 2D NOESY 0.3 mM p53 core U-15N,13C, 2H + Met and Phe (1H); 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 8 2D NOESY 0.3 mM p53 core U-15N,13C, 2H + Met and Arg (1H); 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 9 2D NOESY 0.4 mM p53 core U-15N,13C, 2H (50%); 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298 10 2D NOESY 0.4 mM p53 core N/A; 25 mM Tris-HCl pH 7.1; 150 mM NaCl; 90% H2O, 10% D2O 90% H2O/10% D2O 150 mM 7.1 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 600 2 Bruker AVANCE 800 3 Bruker DRX 500
NMR Refinement Method Details Software torsion angle dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 50 Conformers Submitted Total Number 36 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis CNS 1.0 Brunger et al