☰ Navigation Tabs
Crystal structure of SARS macro domain in complex with ADP-ribose at 1.8 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.9 293 0.1 M Imidazole, 0.9 M NaCitrate, pH 7.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.94 36.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.451 α = 90 b = 55.553 β = 91.39 c = 108.926 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-03-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9792 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 111.8 99.9 0.109 17.7 10.4 41654 41654 11.14
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.847 99.97 0.386 7.1 8.9 54100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.8 111.8 41631 2096 99.91 0.164 0.164 0.162 0.1613 0.206 0.2057 RANDOM 11.779
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.42 0.18 -0.49 0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.244 r_dihedral_angle_3_deg 12.606 r_dihedral_angle_4_deg 12.475 r_dihedral_angle_1_deg 6.243 r_scangle_it 5.072 r_scbond_it 3.281 r_mcangle_it 1.658 r_angle_refined_deg 1.511 r_mcbond_it 1.187 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.244 r_dihedral_angle_3_deg 12.606 r_dihedral_angle_4_deg 12.475 r_dihedral_angle_1_deg 6.243 r_scangle_it 5.072 r_scbond_it 3.281 r_mcangle_it 1.658 r_angle_refined_deg 1.511 r_mcbond_it 1.187 r_nbtor_refined 0.305 r_symmetry_vdw_refined 0.246 r_symmetry_hbond_refined 0.24 r_nbd_refined 0.208 r_xyhbond_nbd_refined 0.128 r_chiral_restr 0.104 r_bond_refined_d 0.016 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3848 Nucleic Acid Atoms Solvent Atoms 432 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling SOLVE phasing