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Crystal Structure of Human Cytochrome P450 2D6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 LIQUID DIFFUSION 5.6 293 1.5M ammonium sulphate, 0.1M sodium citrate, 0.2M potassium sodium tartrate, pH 5.6, LIQUID DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.51 50.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 145.066 α = 90 b = 155.495 β = 90 c = 95.801 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2004-12-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.9538 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 106 90 94111 39448
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.11 90.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.002 106 39438 37837 1601 89.58 0.23198 0.23198 0.2297 0.2296 0.28607 0.2823 RANDOM 57.121
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.5 0.13 -2.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.941 r_dihedral_angle_3_deg 22.112 r_dihedral_angle_4_deg 19.994 r_dihedral_angle_1_deg 7.778 r_scangle_it 2.11 r_angle_refined_deg 1.647 r_scbond_it 1.244 r_mcangle_it 0.741 r_mcbond_it 0.435 r_symmetry_hbond_refined 0.366
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.941 r_dihedral_angle_3_deg 22.112 r_dihedral_angle_4_deg 19.994 r_dihedral_angle_1_deg 7.778 r_scangle_it 2.11 r_angle_refined_deg 1.647 r_scbond_it 1.244 r_mcangle_it 0.741 r_mcbond_it 0.435 r_symmetry_hbond_refined 0.366 r_symmetry_vdw_refined 0.336 r_nbtor_refined 0.323 r_nbd_refined 0.249 r_xyhbond_nbd_refined 0.192 r_chiral_restr 0.109 r_bond_refined_d 0.016 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14228 Nucleic Acid Atoms Solvent Atoms 11 Heterogen Atoms 182
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement