SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 21-30 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | TRIPLE RESONANCE FOR ASSIGNMENT OF PROTEIN: D-HNCA | 3.0 | 322 | |||||
| 2 | D-HNCO | 3.0 | 322 | |||||
| 3 | D-HN(CO)CA | 3.0 | 322 | |||||
| 4 | D-HN(CA)CO D-HNCACB | 3.0 | 322 | |||||
| 5 | D-HN(COCA)CB | 3.0 | 322 | |||||
| 6 | D-HN(CA)CB | 3.0 | 322 | |||||
| 7 | D-C(CC)(CO)NH | 3.0 | 322 | |||||
| 8 | HBHA(CO)NH | 3.0 | 322 | |||||
| 9 | HCACO | 3.0 | 322 | |||||
| 10 | HNCO | 3.0 | 322 | |||||
| 11 | HNHA | 3.0 | 322 | |||||
| 12 | HCCH-COSY | 3.0 | 322 | |||||
| 13 | HCCH-TOCSY | 3.0 | 322 | |||||
| 14 | 4D HCCH 13C-13C NOE | 3.0 | 322 | |||||
| 15 | QUANTITATIVE J CORRELATION FOR COUPLING CONSTANTS | 3.0 | 322 | |||||
| 16 | 3D 15N-SEPARATED NOE AND ROE | 3.0 | 322 | |||||
| 17 | 3D 13C-SEPARATED NOE | 3.0 | 322 | |||||
| 18 | 3D 13C-SEPARATED/12C_FILTERED NOE | 3.0 | 322 | |||||
| 19 | 3D 13C-SEPARATED/15N-FILTERED NOE | 3.0 | 322 | |||||
| 20 | 3D 15N-SEPARATED/13C-FILTERED NOE | 3.0 | 322 | |||||
| 21 | 4D 15N/15N-SEPARATED NOE | 3.0 | 322 | |||||
| 22 | 4D 15N/13C-SEPARATED NOE | 3.0 | 322 | |||||
| 23 | 4D 13C/13C-SEPARATED NOE EXPERIMENTS: 3D HCA(CO)N FOR THREE-BOND AMIDE DEUTERIUM ISOTOPE SHIFTS; | 3.0 | 322 | |||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX500 | 500 |
| 2 | Bruker | DMX600 | 600 |
| 3 | Bruker | DMX750 | 750 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | NO REFINEMENT WAS DONE | CNS |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | |
| Conformers Calculated Total Number | 40 |
| Conformers Submitted Total Number | 10 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | CNS | ||
| 2 | refinement | CNS | ||














