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The F20Y mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.4 277 MPD 70%, pH 7.4, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.613095 52.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.242 α = 90 b = 67.483 β = 90 c = 34.328 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2004-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 0.71 SPring-8 BL44B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1 21.9 62471
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R 1 10 58010 58010 87.6 0.115 0.112 0.112 0.1135 0.15 0.1485 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 1335
RMS Deviations Key Refinement Restraint Deviation s_approx_iso_adps 0.103 s_non_zero_chiral_vol 0.1 s_zero_chiral_vol 0.087 s_similar_adp_cmpnt 0.041 s_angle_d 0.037 s_anti_bump_dis_restr 0.032 s_from_restr_planes 0.0268 s_bond_d 0.021 s_rigid_bond_adp_cmpnt 0.006 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 802 Nucleic Acid Atoms Solvent Atoms 361 Heterogen Atoms 172
Software Software Software Name Purpose SHELX model building SHELXL-97 refinement HKL-2000 data reduction CCP4 data scaling SHELX phasing