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Solution structure of RNA binding domain in Insulin-like growth factor 2 mRNA binding protein 3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O 90% H2O/10% D2O 120mM 7.0 ambient 200 2 3D_13C-separated_NOESY 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O 90% H2O/10% D2O 120mM 7.0 ambient 200
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dyanamics, restrainted molecular dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations, structures with the lowest energy, target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.5 Bruker 2 processing NMRPipe 20030801 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B.A. 4 data analysis KUJIRA 0.9746 Kobayashi, N. 5 data analysis Olivia 1.10.5 Yokochi, M. 6 structure solution CYANA 2.0.17 Guntert, P. 7 refinement CYANA 2.0.17 Guntert, P.