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2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 1.18mM ubiquitin-like domain U-15N, 13C; 20mM d-Tris-HCl (pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O 90% H2O/10% D2O 120mM 7.0 ambient 296.0 2 3D_13C-separated_NOESY 1.18mM ubiquitin-like domain U-15N, 13C; 20mM d-Tris-HCl (pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O 90% H2O/10% D2O 120mM 7.0 ambient 296.0
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, restrained molecular dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations,target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 2.6 Bruker 2 processing NMRPipe 20031121 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B. A. 4 data analysis KUJIRA 0.9748 Kobayashi, N. 5 structure solution CYANA 2.0.17 Guntert, P. 6 refinement CYANA 2.0.17 Guntert, P.