2DMJ
Solution structure of the first zf-PARP domain of human Poly(ADP-ribose)polymerase-1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1.02mM uniformly 13C, 15N labeled protein; 20mM malonic acid, 100mM NaCl, 0.1mM DTT, 0.02% NaN3, 0.05mM ZnCl2, 1mM NTA; 10% D2O, 90% H2O | 10% D2O, 90% H2O | 120mM | 6.0 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 1.02mM uniformly 13C, 15N labeled protein; 20mM malonic acid, 100mM NaCl, 0.1mM DTT, 0.02% NaN3, 0.05mM ZnCl2, 1mM NTA; 10% D2O, 90% H2O | 10% D2O, 90% H2O | 120mM | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function, structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1C | Varian |
2 | processing | NMRPipe | 20020425 | Delaglio, F. |
3 | data analysis | NMRView | 5.0.4 | Johnson, B.A. |
4 | data analysis | KUJIRA | 0.9318 | Kobayashi, N. |
5 | structure solution | CYANA | 2.0.17 | Guntert, P. |
6 | refinement | CYANA | 2.0.17 | Guntert, P. |