2D2W
Solution structure and Dynamics of the DNA-Binding Domain of Myocyte Nuclear Factor
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 3mM MNF;25mM phosphate buffer; 100mM NaCl | 90% H2O/10% D2O | 125 | 6 | ambient | 300 | |
2 | 2D TOCSY | 3mM MNF;25mM phosphate buffer; 100mM NaCl | 90% H2O/10% D2O | 125 | 6 | ambient | 300 | |
3 | 3D_15N-separated_NOESY | 3mM MNF U-15N;25mM phosphate buffer; 100mM NaCl | 90% H2O/10% D2O | 125 | 6 | ambient | 300 | |
4 | 3D_13C-separated_NOESY | 3mM MNF U-15N,13C;25mM phosphate buffer; 100mM NaCl | 90% H2O/10% D2O | 125 | 6 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | HNCA, HN(CO)CA, HNCACB, CBCA(CO)NH, HBHA(CACB)NH, HBHA(CACBCO)NH, HCCH-TOCSY, HCCH-COSY |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | |
2 | data analysis | AURELIA | 2.7.10 | Neidig |
3 | processing | XwinNMR | 2.6 | Bruker |