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Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 277 PEG8000, magnesium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.5 49.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.352 α = 90 b = 60.201 β = 125.1 c = 81.585 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS 2001-05-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL45XU 1.02 SPring-8 BL45XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 40.22 97.7 53428 53428
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.65 1.71 83.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.65 40.22 48097 48097 5373 97.64 0.1554 0.15439 0.15439 0.1576 0.16455 0.1571 RANDOM 15.455
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 0.24 0.75 -0.83
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.734 r_dihedral_angle_4_deg 18.457 r_dihedral_angle_3_deg 11.45 r_dihedral_angle_1_deg 5.373 r_scangle_it 2.701 r_scbond_it 1.666 r_mcangle_it 1.133 r_angle_refined_deg 1.131 r_mcbond_it 0.934 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.734 r_dihedral_angle_4_deg 18.457 r_dihedral_angle_3_deg 11.45 r_dihedral_angle_1_deg 5.373 r_scangle_it 2.701 r_scbond_it 1.666 r_mcangle_it 1.133 r_angle_refined_deg 1.131 r_mcbond_it 0.934 r_nbtor_refined 0.308 r_nbd_refined 0.218 r_symmetry_vdw_refined 0.158 r_xyhbond_nbd_refined 0.102 r_symmetry_hbond_refined 0.096 r_metal_ion_refined 0.089 r_symmetry_metal_ion_refined 0.086 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3233 Nucleic Acid Atoms Solvent Atoms 585 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling CNS phasing