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A novel cutinase-like protein from Cryptococcus sp.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.9 277 1.3-1.6M Sodium citrate, pH 5.9, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.10541 41.579067
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 34.478 α = 90 b = 82.807 β = 90 c = 123.514 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 Mirror-Monochromator 2002-05-27 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 4 Mirror-Monochromator 2002-05-27 M MAD 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A 0.978 Photon Factory BL-6A 2 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A 1.0717, 1.0723, 0.9779 Photon Factory BL-6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.05 23 95.4 0.071 0.067 7.4 7.1 157936 157936 1 1 5.364
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.05 1.11 95.4 0.38 0.333 2.2 3.7 19883
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.05 20 142150 142150 15686 95.33 0.14843 0.14843 0.14746 0.1534 0.15716 0.1623 RANDOM 8.543
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.03 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.603 r_scangle_it 1.734 r_sphericity_free 1.518 r_sphericity_bonded 1.321 r_angle_refined_deg 1.167 r_scbond_it 1.157 r_mcangle_it 0.878 r_mcbond_it 0.524 r_rigid_bond_restr 0.502 r_nbd_refined 0.189
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.603 r_scangle_it 1.734 r_sphericity_free 1.518 r_sphericity_bonded 1.321 r_angle_refined_deg 1.167 r_scbond_it 1.157 r_mcangle_it 0.878 r_mcbond_it 0.524 r_rigid_bond_restr 0.502 r_nbd_refined 0.189 r_symmetry_vdw_refined 0.149 r_symmetry_hbond_refined 0.093 r_chiral_restr 0.079 r_xyhbond_nbd_refined 0.076 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2938 Nucleic Acid Atoms Solvent Atoms 410 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction CCP4 data scaling SOLVE phasing