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Structure of Human Casein kinase 1 gamma-1 in complex with 2-(2- Hydroxyethylamino)-6-(3-chloroanilino)-9-isopropylpurine
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2CHL PDB ENTRY 2CHL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 0.1M BIS-TRIS PH 5.5, 0.05M AMMONIUM ACETATE, 12% PEG 10K
Crystal Properties Matthews coefficient Solvent content 2.57 52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.219 α = 90 b = 57.166 β = 90 c = 129.229 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2006-05-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 50 99.7 0.07 16.76 7.83 38266 3.6 23.56
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.85 98.8 0.46 3.62 6.72
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2CHL 1.75 50 36288 1914 99.8 0.167 0.165 0.1741 0.204 0.2077 RANDOM 29.41
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.36 0.27 -1.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.245 r_dihedral_angle_4_deg 16.037 r_dihedral_angle_3_deg 13.651 r_scangle_it 7.834 r_scbond_it 6.045 r_dihedral_angle_1_deg 5.91 r_mcangle_it 4.225 r_mcbond_it 2.893 r_angle_refined_deg 1.314 r_angle_other_deg 0.973
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.245 r_dihedral_angle_4_deg 16.037 r_dihedral_angle_3_deg 13.651 r_scangle_it 7.834 r_scbond_it 6.045 r_dihedral_angle_1_deg 5.91 r_mcangle_it 4.225 r_mcbond_it 2.893 r_angle_refined_deg 1.314 r_angle_other_deg 0.973 r_symmetry_vdw_other 0.217 r_nbd_refined 0.208 r_nbd_other 0.188 r_nbtor_refined 0.186 r_xyhbond_nbd_refined 0.148 r_symmetry_hbond_refined 0.12 r_symmetry_vdw_refined 0.103 r_nbtor_other 0.091 r_chiral_restr 0.078 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2385 Nucleic Acid Atoms Solvent Atoms 293 Heterogen Atoms 81
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing