☰ Navigation Tabs
Human Monoamine Oxidase A in complex with Clorgyline, Crystal Form A
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1S2Q PDB ENTRY 1S2Q
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 PROTEIN WAS CRYSTALLIZED FROM 6% PEG 6000, 100 MM LISULPHATE, 100 MM NACITRATE, 50 MM KPI PH 7.0.
Crystal Properties Matthews coefficient Solvent content 2.66 45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 143.493 α = 90 b = 109.599 β = 95.18 c = 81.329 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2005-02-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 15 96.9 0.01 6.7 23085
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.1 97.3 0.52 6.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1S2Q 3 87.04 23085 1245 96.5 0.195 0.192 0.1942 0.238 0.2419 RANDOM 63.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.82 1.86 -3.67 -1.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.414 r_dihedral_angle_4_deg 22.894 r_dihedral_angle_3_deg 21.175 r_dihedral_angle_1_deg 6.385 r_angle_refined_deg 1.696 r_scangle_it 1.609 r_scbond_it 1.084 r_mcangle_it 0.585 r_symmetry_vdw_refined 0.366 r_mcbond_it 0.338
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.414 r_dihedral_angle_4_deg 22.894 r_dihedral_angle_3_deg 21.175 r_dihedral_angle_1_deg 6.385 r_angle_refined_deg 1.696 r_scangle_it 1.609 r_scbond_it 1.084 r_mcangle_it 0.585 r_symmetry_vdw_refined 0.366 r_mcbond_it 0.338 r_nbtor_refined 0.326 r_nbd_refined 0.251 r_xyhbond_nbd_refined 0.176 r_chiral_restr 0.103 r_symmetry_hbond_refined 0.1 r_bond_refined_d 0.018 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7046 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 140
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling AMoRE phasing