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Structure of the C-terminal receptor-binding domain of avian reovirus fibre sigmaC, Cd crystal form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 100 MM TRIS-HCL PH 8.5, 1.5 M AMMONIUM SULPHATE, 12 % GLYCEROL, 10 MM CADMIUM SULPHATE
Crystal Properties Matthews coefficient Solvent content 2.9 57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.075 α = 90 b = 73.075 β = 90 c = 69.928 γ = 120
Symmetry Space Group P 3 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH TOROIDAL MIRROR 2005-01-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM16 ESRF BM16
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.32 36.5 95.8 0.08 7.1 10.5 9602 48.06
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.32 2.45 71.6 0.34 2.1 10
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.35 69.84 8348 929 99.2 0.189 0.183 0.243 RANDOM 39.08
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.02 1.01 2.02 -3.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.814 r_dihedral_angle_4_deg 17.23 r_dihedral_angle_3_deg 15.183 r_dihedral_angle_1_deg 7.363 r_scangle_it 7.146 r_scbond_it 5.138 r_mcangle_it 3.238 r_mcbond_it 1.912 r_angle_refined_deg 1.608 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.814 r_dihedral_angle_4_deg 17.23 r_dihedral_angle_3_deg 15.183 r_dihedral_angle_1_deg 7.363 r_scangle_it 7.146 r_scbond_it 5.138 r_mcangle_it 3.238 r_mcbond_it 1.912 r_angle_refined_deg 1.608 r_nbtor_refined 0.3 r_nbd_refined 0.199 r_symmetry_hbond_refined 0.199 r_xyhbond_nbd_refined 0.155 r_symmetry_vdw_refined 0.133 r_chiral_restr 0.114 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1285 Nucleic Acid Atoms Solvent Atoms 120 Heterogen Atoms 7
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SHELXD phasing