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MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1NBV PDB ENTRY 1NBV
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 PROTEIN WAS CRYSTALLIZED FROM 15% (W/V) PEG 4000, 100MM NA ACETATE AND 50MM TRIS HCL PH 8.5
Crystal Properties Matthews coefficient Solvent content 3.14 60.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.6 α = 90 b = 53.6 β = 90 c = 83.8 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE RIGAKU MSC DOUBLE FOCUSING MIRRORS 1995-04-18 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 20 86.9 0.064 7.21 1.5 7836 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.5 2.59 87.5 0.225 2.6 1.5
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1NBV 2.5 10 7740 7740 84 0.187 0.1676 27.44
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 24.083 p_staggered_tor 17.559 p_scangle_it 8.05 p_scbond_it 5.606 p_planar_tor 4.259 p_mcangle_it 2.054 p_mcbond_it 1.199 p_multtor_nbd 0.252 p_xyhbond_nbd 0.214 p_singtor_nbd 0.184
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 24.083 p_staggered_tor 17.559 p_scangle_it 8.05 p_scbond_it 5.606 p_planar_tor 4.259 p_mcangle_it 2.054 p_mcbond_it 1.199 p_multtor_nbd 0.252 p_xyhbond_nbd 0.214 p_singtor_nbd 0.184 p_chiral_restr 0.128 p_angle_d 0.037 p_planar_d 0.037 p_bond_d 0.011 p_plane_restr 0.01 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1789 Nucleic Acid Atoms Solvent Atoms 55 Heterogen Atoms 33
Software Software Software Name Purpose MOSFLM data reduction ROTAVATA data reduction AMoRE phasing PROLSQ refinement CCP4 data scaling