2BF0

crystal structure of the rpr of pcf11


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.825% PEG 4000, 0.1 M TRIS PH 7.0, 0.2 M (NH4)2SO4 AND 10 MM CACL2
Crystal Properties
Matthews coefficientSolvent content
2.444

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 75.494α = 90
b = 75.494β = 90
c = 56.135γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCD2004-05-15MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID290.976,0.9792,0.9795ESRFID29

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.3201000.0636771912

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.315719135099.50.260.2580.282RANDOM30.88
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.52-1.523.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg15.958
r_scangle_it3.818
r_dihedral_angle_1_deg3.8
r_scbond_it2.243
r_angle_refined_deg1.845
r_mcangle_it1.507
r_symmetry_hbond_refined0.907
r_mcbond_it0.801
r_symmetry_vdw_refined0.375
r_nbd_refined0.283
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg15.958
r_scangle_it3.818
r_dihedral_angle_1_deg3.8
r_scbond_it2.243
r_angle_refined_deg1.845
r_mcangle_it1.507
r_symmetry_hbond_refined0.907
r_mcbond_it0.801
r_symmetry_vdw_refined0.375
r_nbd_refined0.283
r_xyhbond_nbd_refined0.201
r_chiral_restr0.094
r_bond_refined_d0.01
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_2_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1074
Nucleic Acid Atoms
Solvent Atoms56
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing