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High Resolution Structure of the HDGF PWWP Domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 50 mM KCl; 1 mM DTT 90% H20, 10% D2O 50 mM 6.5 ambient 301 2 3D_15N-separated_NOESY HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 50 mM KCl; 1 mM DTT 90% H20, 10% D2O 50 mM 6.5 ambient 301 3 HNHA HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 50 mM KCl; 1 mM DTT 90% H20, 10% D2O 50 mM 6.5 ambient 301 4 TROSY-HNCO with HN couplings HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 200 mM NaCl; 1 mM DTT 90% H20, 10% D2O 200 mM 6.5 ambient 301 5 TROSY-HNCO with NCo couplings HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 200 mM NaCl; 1 mM DTT 90% H20, 10% D2O 200 mM 6.5 ambient 301 6 TROSY-HNCO with CoCa couplings HDGF U-15N,13C; 20 mM phosphate buffer 6.5; 200 mM NaCl; 1 mM DTT 90% H20, 10% D2O 200 mM 6.5 ambient 301
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 500
NMR Refinement Method Details Software simulated annealing the structure is baed on 1415 distance restraints, 79 dihedral angles, 23 hydrogen bonds, 54 JHNHA couplings and 258 RDCs NMRPipe
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number 400 Conformers Submitted Total Number 26 Representative Model 1 (n/a)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.3 Delaglio et al 2 data analysis Sparky 3.110 Goodard and Kneller 3 refinement CNS 1.1 Brunger et al 4 data analysis CYANA 1.0.5 Guntert et al.