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T4 Lysozyme mutant L99A at ambient pressure
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.1 293 ~ 2.0 M Na/K phosphate, 50 mM beta-mercaptoethanol, pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.82 56.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.956 α = 90 b = 60.956 β = 90 c = 96.597 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 CCD ADSC QUANTUM 4 mirrors 2004-11-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 0.9174 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 52.78 98.08 0.073 7969 7969
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.462 99.35
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.4 52.78 7969 7969 408 98.08 0.154 0.15352 0.15023 0.152 0.2179 0.1574 RANDOM 30.153
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.09 0.05 0.09 -0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.01 r_dihedral_angle_3_deg 15.503 r_dihedral_angle_4_deg 15.461 r_scangle_it 6.277 r_dihedral_angle_1_deg 5.801 r_scbond_it 3.928 r_mcangle_it 2.023 r_angle_refined_deg 1.647 r_mcbond_it 1.259 r_symmetry_hbond_refined 0.354
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.01 r_dihedral_angle_3_deg 15.503 r_dihedral_angle_4_deg 15.461 r_scangle_it 6.277 r_dihedral_angle_1_deg 5.801 r_scbond_it 3.928 r_mcangle_it 2.023 r_angle_refined_deg 1.647 r_mcbond_it 1.259 r_symmetry_hbond_refined 0.354 r_nbtor_refined 0.309 r_symmetry_vdw_refined 0.235 r_nbd_refined 0.214 r_xyhbond_nbd_refined 0.164 r_chiral_restr 0.106 r_bond_refined_d 0.021 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1289 Nucleic Acid Atoms Solvent Atoms 100 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement Adxv data processing SCALEPACK data scaling