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Pseudomonas aeruginosa RhlG/NADP active-site complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 290 0.1 M HEPES pH 7.0, 0.3 M Ammonium Sulfate, 12 % PEG 4K, VAPOR DIFFUSION, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.5 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.138 α = 90 b = 142.61 β = 90 c = 95.684 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 170 CCD MARRESEARCH Si-220 2005-03-24 M SINGLE WAVELENGTH 2 1 x-ray 170 CCD MARRESEARCH Si-220 2005-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 0.976250 APS 22-BM 2 SYNCHROTRON APS BEAMLINE 22-ID 0.979260 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.3 40 99.1 0.117 5.1 7.4 22609 22417
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.4 98.7 0.341 2.3 7.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD (crystal 2) followed by molecular replacement (crystal 1) THROUGHOUT 2.3 20 2 21164 20910 1137 98.8 0.214 0.214 0.212 0.211 0.264 0.266 RANDOM 24.35
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.026 r_dihedral_angle_3_deg 18.007 r_dihedral_angle_4_deg 16.281 r_dihedral_angle_1_deg 5.473 r_scangle_it 1.827 r_angle_refined_deg 1.2 r_scbond_it 1.113 r_mcangle_it 1.037 r_mcbond_it 0.601 r_nbtor_refined 0.294
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.026 r_dihedral_angle_3_deg 18.007 r_dihedral_angle_4_deg 16.281 r_dihedral_angle_1_deg 5.473 r_scangle_it 1.827 r_angle_refined_deg 1.2 r_scbond_it 1.113 r_mcangle_it 1.037 r_mcbond_it 0.601 r_nbtor_refined 0.294 r_nbd_refined 0.181 r_symmetry_hbond_refined 0.168 r_symmetry_vdw_refined 0.151 r_xyhbond_nbd_refined 0.134 r_chiral_restr 0.08 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3697 Nucleic Acid Atoms Solvent Atoms 180 Heterogen Atoms 48
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling CNS phasing AMoRE phasing CNS refinement