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Crystal Structure of Protein of Unknown Function ATU1913 from Agrobacterium tumefaciens str. C58
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 298 2M NH4Sulphate,5% iso-Propanol, 2Mm K/Na Tartrate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.37 47.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.428 α = 90 b = 99.646 β = 90 c = 55.827 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2005-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9795 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 93.8 0.054 16.9 3.7 20120 10811 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 100 0.169 9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.8 49.81 10167 9688 479 94.02 0.2129 0.2129 0.2125 0.2134 0.2207 0.2206 RANDOM 35.442
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.21 -1.05 -0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.011 r_dihedral_angle_4_deg 22.144 r_dihedral_angle_3_deg 14.094 r_dihedral_angle_1_deg 5.594 r_scangle_it 4.562 r_scbond_it 3.082 r_mcangle_it 1.781 r_angle_refined_deg 1.557 r_mcbond_it 1.179 r_nbtor_refined 0.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.011 r_dihedral_angle_4_deg 22.144 r_dihedral_angle_3_deg 14.094 r_dihedral_angle_1_deg 5.594 r_scangle_it 4.562 r_scbond_it 3.082 r_mcangle_it 1.781 r_angle_refined_deg 1.557 r_mcbond_it 1.179 r_nbtor_refined 0.309 r_symmetry_vdw_refined 0.213 r_nbd_refined 0.206 r_symmetry_hbond_refined 0.176 r_xyhbond_nbd_refined 0.15 r_chiral_restr 0.106 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 795 Nucleic Acid Atoms Solvent Atoms 71 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling SOLVE phasing