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Crystal structure of the protein-protein complex between F82I cytochrome c and cytochrome c peroxidase
Crystallization Crystal Properties Matthews coefficient Solvent content 2.3 46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.802 α = 90 b = 51.989 β = 90 c = 183.669 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 95 CCD ADSC QUANTUM 315 2004-04-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X25 1.1 NSLS X25
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 20 11947 610 100 0.263 0.263 0.262 0.257 0.289 0.2816 RANDOM 28.553
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.25 0.74 -2.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.011 r_dihedral_angle_4_deg 29.733 r_dihedral_angle_3_deg 24.06 r_scangle_it 8.1 r_scbond_it 5.527 r_mcangle_it 3.379 r_angle_refined_deg 2.266 r_mcbond_it 2.028 r_dihedral_angle_1_deg 1.566 r_symmetry_hbond_refined 0.375
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.011 r_dihedral_angle_4_deg 29.733 r_dihedral_angle_3_deg 24.06 r_scangle_it 8.1 r_scbond_it 5.527 r_mcangle_it 3.379 r_angle_refined_deg 2.266 r_mcbond_it 2.028 r_dihedral_angle_1_deg 1.566 r_symmetry_hbond_refined 0.375 r_symmetry_vdw_refined 0.261 r_nbd_refined 0.188 r_xyhbond_nbd_refined 0.183 r_chiral_restr 0.169 r_gen_planes_refined 0.021 r_bond_refined_d 0.02
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3214 Nucleic Acid Atoms Solvent Atoms 107 Heterogen Atoms 86
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction AMoRE phasing