Structural and functional analysis of ADA2 alpha swirm domain
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 1mM ada2 alpha swirm domain, U-15N, 13C, 50mM phosphate buffer, 100mm NaCl, pH 6.5 | 100% D2O | 100mM NaCl | 6.5 | 1 atm | 293 | |
| 2 | HACA | 1mM ada2 alpha swirm domain, U-15N, 13C, 50mM phosphate buffer, 100mm NaCl, pH 6.5, 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM NaCl | 6.5 | 1 atm | 293 | |
| 3 | HNCOCA | 1mM ada2 alpha swirm domain, U-15N, 13C, 50mM phosphate buffer, 100mm NaCl, pH 6.5, 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM NaCl | 6.5 | 1 atm | 293 | |
| 4 | HNCACB | 1mM ada2 alpha swirm domain, U-15N, 13C, 50mM phosphate buffer, 100mm NaCl, pH 6.5, 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM NaCl | 6.5 | 1 atm | 293 | |
| 5 | HNCOCACB | 1mM ada2 alpha swirm domain, U-15N, 13C, 50mM phosphate buffer, 100mm NaCl, pH 6.5, 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM NaCl | 6.5 | 1 atm | 293 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| 2 | Bruker | DRX | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing torsion angle dynamics | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structure with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 1 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structure was determined using triple-resonance NMR spectroscopy. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | Bax | |
| 2 | refinement | CNS | 1.1 | Brunger et al |
| 3 | data analysis | NMRView | 5.0 | Johnson |
| 4 | refinement | ARIA | 1.2 | Nigles, M |














