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Crystal Structure of Human DHRS6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 298 Ammonium sulphate, Mes, PEG monomethylether 5000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.2 43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.092 α = 106.05 b = 62.055 β = 105.95 c = 74.042 γ = 100.97
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS 2005-07-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E SUPERBRIGHT
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.84 66.67 89.7 84879 76176
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.84 1.9 52.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.84 66.67 74714 1464 89.75 0.16797 0.16797 0.16691 0.1859 0.22417 0.2022 RANDOM 26.061
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 -0.09 0.27 -0.36 0.32 0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.364 r_dihedral_angle_4_deg 17.168 r_dihedral_angle_3_deg 13.25 r_dihedral_angle_1_deg 6.242 r_scangle_it 3.505 r_scbond_it 2.504 r_angle_refined_deg 1.744 r_mcangle_it 1.422 r_mcbond_it 1.018 r_angle_other_deg 0.925
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.364 r_dihedral_angle_4_deg 17.168 r_dihedral_angle_3_deg 13.25 r_dihedral_angle_1_deg 6.242 r_scangle_it 3.505 r_scbond_it 2.504 r_angle_refined_deg 1.744 r_mcangle_it 1.422 r_mcbond_it 1.018 r_angle_other_deg 0.925 r_mcbond_other 0.326 r_symmetry_vdw_other 0.29 r_nbd_refined 0.213 r_nbd_other 0.193 r_symmetry_hbond_refined 0.187 r_xyhbond_nbd_refined 0.178 r_nbtor_refined 0.175 r_symmetry_vdw_refined 0.159 r_chiral_restr 0.106 r_nbtor_other 0.088 r_bond_refined_d 0.022 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7365 Nucleic Acid Atoms Solvent Atoms 868 Heterogen Atoms 196
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling PHASER phasing