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MJ0158, NaBH4-reduced form
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2AEU PDB ID 2AEU
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 2.2 293 PEG400, ammonium sulfate, pH 2.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.1 40.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.998 α = 90 b = 72.736 β = 90 c = 82.625 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH Mirrors 2001-04-05 M MAD 2 1 x-ray 100 CCD MARRESEARCH Mirrors 2001-04-05 M MAD 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 0.9796, 0.9808, 0.95 MPG/DESY, HAMBURG BW6 2 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 0.9167, 0.9183, 0.90 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.95 18 90.5 26840 24290
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2 2.1 86.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ID 2AEU 2 18 23006 20860 1128 90.7 0.22464 0.22464 0.2221 0.2171 0.2707 0.2261 RANDOM 38.776
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.06 0.95 -0.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.294 r_dihedral_angle_3_deg 16.52 r_dihedral_angle_4_deg 12.855 r_dihedral_angle_1_deg 5.686 r_scangle_it 3.537 r_mcangle_it 3.141 r_scbond_it 2.567 r_mcbond_it 2.292 r_angle_refined_deg 1.174 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.294 r_dihedral_angle_3_deg 16.52 r_dihedral_angle_4_deg 12.855 r_dihedral_angle_1_deg 5.686 r_scangle_it 3.537 r_mcangle_it 3.141 r_scbond_it 2.567 r_mcbond_it 2.292 r_angle_refined_deg 1.174 r_nbtor_refined 0.3 r_nbd_refined 0.193 r_symmetry_vdw_refined 0.193 r_xyhbond_nbd_refined 0.132 r_symmetry_hbond_refined 0.119 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2894 Nucleic Acid Atoms Solvent Atoms 180 Heterogen Atoms 45
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling MOLREP phasing