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Crystal structure of the N-terminal, dimerization domain of Siah Interacting Protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 10.5 293 ammonium sulphate, CAPS, lithium sulphate, pH 10.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.35 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.793 α = 90 b = 152.609 β = 90 c = 36.988 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2002-03-17 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 4 2002-03-30 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-1 0.826533 SSRL BL9-1 2 SYNCHROTRON SSRL BEAMLINE BL9-2 0.91833, 0.83208, 0.92014, 0.95369 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.2 50 96.7 0.046 65 8.3 50772 -4 16.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.2 1.22 0.381 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.2 30 50769 2568 96.61 0.17489 0.17366 0.1722 0.19833 0.1985 RANDOM 17.758
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.64 -0.38 -0.26
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 5.421 r_sphericity_bonded 5.333 r_scangle_it 4.77 r_dihedral_angle_1_deg 4.043 r_scbond_it 3.409 r_mcangle_it 2.859 r_angle_refined_deg 1.936 r_mcbond_it 1.828 r_rigid_bond_restr 1.69 r_nbd_refined 0.236
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 5.421 r_sphericity_bonded 5.333 r_scangle_it 4.77 r_dihedral_angle_1_deg 4.043 r_scbond_it 3.409 r_mcangle_it 2.859 r_angle_refined_deg 1.936 r_mcbond_it 1.828 r_rigid_bond_restr 1.69 r_nbd_refined 0.236 r_symmetry_vdw_refined 0.215 r_symmetry_hbond_refined 0.18 r_xyhbond_nbd_refined 0.175 r_chiral_restr 0.11 r_bond_refined_d 0.017 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1244 Nucleic Acid Atoms Solvent Atoms 230 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing