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Crystal structure of KvAP-33H1 Fv complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 293 sodium citrate, Tric-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 4 69.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 136.362 α = 90 b = 136.362 β = 90 c = 191.812 γ = 90
Symmetry Space Group P 42 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2004-11-10 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 210 2004-11-18 M 3 1 x-ray 100 CCD ADSC Q210 2004-12-07 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X25 1.1 NSLS X25 2 SYNCHROTRON ALS BEAMLINE 8.2.1 1.1 ALS 8.2.1 3 SYNCHROTRON CHESS BEAMLINE A1 0.9795 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 3.9 57.7 0.09 9.7 6.94 16257
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.9 4.1 97.6 0.465 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 3.9 57.89 16234 789 94.7 0.358 0.358 0.3502 0.392 0.4039 RANDOM 187.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 34.47 34.47 -68.95
RMS Deviations Key Refinement Restraint Deviation c_mcangle_it 27.94 c_scangle_it 26.67 c_dihedral_angle_d 22.5 c_scbond_it 18.27 c_mcbond_it 18.01 c_angle_deg 1.2 c_improper_angle_d 0.85 c_bond_d 0.005 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_mcangle_it 27.94 c_scangle_it 26.67 c_dihedral_angle_d 22.5 c_scbond_it 18.27 c_mcbond_it 18.01 c_angle_deg 1.2 c_improper_angle_d 0.85 c_bond_d 0.005 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6742 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 4
Software Software Software Name Purpose CNS refinement MOSFLM data reduction CCP4 data scaling MLPHARE phasing