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KAT6A SURFACE MUTANT IN COMPLEX WITH CO-FACTOR ACETYL-CO-A
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2OZU
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 PEG 3350, sodium acetate, HEPES
Crystal Properties Matthews coefficient Solvent content 2.15 42.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.298 α = 85.607 b = 64.587 β = 85.18 c = 115.622 γ = 89.607
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2017-09-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.9184 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.13 44.59 90.7 0.082 0.11 0.995 7.3 2.1 54078 35.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.13 2.26 89.2 0.463 0.626 0.744 1.8 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 2.134 44.588 54076 2100 90.716 0.227 0.225 0.2297 0.2754 0.2803 37.386
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.355 0.252 1.562 -2.472 -0.266 0.334
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.209 r_dihedral_angle_4_deg 21.366 r_dihedral_angle_3_deg 16.181 r_lrange_it 7.114 r_lrange_other 7.072 r_dihedral_angle_1_deg 6.835 r_scangle_it 2.943 r_scangle_other 2.943 r_mcangle_other 2.165 r_mcangle_it 2.164
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.209 r_dihedral_angle_4_deg 21.366 r_dihedral_angle_3_deg 16.181 r_lrange_it 7.114 r_lrange_other 7.072 r_dihedral_angle_1_deg 6.835 r_scangle_it 2.943 r_scangle_other 2.943 r_mcangle_other 2.165 r_mcangle_it 2.164 r_scbond_other 1.939 r_scbond_it 1.938 r_angle_refined_deg 1.359 r_mcbond_it 1.276 r_mcbond_other 1.256 r_angle_other_deg 1.119 r_symmetry_xyhbond_nbd_refined 0.26 r_nbd_other 0.208 r_symmetry_nbd_refined 0.191 r_nbd_refined 0.185 r_symmetry_nbd_other 0.174 r_xyhbond_nbd_refined 0.169 r_nbtor_refined 0.163 r_ncsr_local_group_4 0.1 r_ncsr_local_group_1 0.098 r_symmetry_xyhbond_nbd_other 0.093 r_ncsr_local_group_6 0.092 r_ncsr_local_group_3 0.09 r_ncsr_local_group_5 0.085 r_ncsr_local_group_2 0.079 r_symmetry_nbtor_other 0.073 r_chiral_restr 0.061 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8970 Nucleic Acid Atoms Solvent Atoms 630 Heterogen Atoms 275
Software Software Software Name Purpose REFMAC refinement XDS data reduction pointless data scaling PHASER phasing